Onboarding: Sync Jira Mode
This guide walks through the full onboarding wizard for teams that use Jira as a ticketing system. In this mode, Clears AI syncs work items between Jira and the Clears AI Board, letting you trigger AI execution on stories from your existing Jira backlog.
Step 1: Connect GitHub (Required)
GitHub is the core integration - Clears AI needs access to your repositories to analyze code and create pull requests.

- Click Install GitHub App to open the GitHub authorization popup
- Select the GitHub organization or user account to install the app on
- Choose which repositories to grant access to (you can select all or specific repos)
- Once installed, the wizard shows your available repositories
- Select at least one repository to use as an execution target - these are the repos the AI agent will work in
- Click Continue
Step 2: Connect Jira
Connect your Atlassian workspace so Clears AI can sync with your Jira projects:
- Click Connect Jira to open the OAuth authorization popup
- Sign in to your Atlassian account and authorize Clears AI
- Once connected, the wizard displays your Jira domain (e.g.,
your-team.atlassian.net) - Click Continue
Step 3: Configure Jira Webhook
This step sets up a webhook so Jira notifies Clears AI when work items change:
- Navigate to Jira Settings → System → WebHooks (a direct link is provided)
- Create a new webhook named Clears
- Copy the webhook URL from the wizard into Jira's URL field
- Generate a webhook secret in the wizard and paste it into Jira
- Enable the Issue checkboxes: Created, Updated, Deleted
- Save the webhook in Jira, then click Continue
Step 4: Add Jira Statuses
Clears AI uses custom statuses to track stories through the execution pipeline:
- Navigate to your Jira Statuses page (a direct link is provided)
- Add the following statuses with the In Progress category:
- Enriched - story has been analyzed by AI
- Product Approved - story spec approved by product owner
- Ready For Dev - subtasks generated, ready for implementation
- Validation - PRs created, awaiting review
- Add workflow transitions so stories can move to these statuses
- Click Continue
Step 5: Connect Slack (Optional)
Slack enables notifications and interactive Q&A during story analysis:

- Click Install Slack App to open the authorization popup
- Select your Slack workspace and authorize Clears AI
- Once connected, the workspace name is displayed
This step is optional - click Skip for now if you prefer to set it up later. Without Slack, Q&A interactions happen directly on the Board.
Completing Onboarding
After finishing all steps, the wizard marks your onboarding as complete and redirects you to the Board - the main workspace where you'll create and manage stories.
Your onboarding progress is saved automatically, so if you close the wizard mid-way, you'll resume where you left off on your next sign-in.
Next Steps
With your account configured, continue to Connecting Integrations for a deeper dive into each integration, or jump to Creating Your First AI Story to start using the platform.